Transcript: ENSDART00000112470.4 ccdc88b-202

Description

coiled-coil domain containing 88B [Source:ZFIN;Acc:ZDB-GENE-080303-31]

Location

About this transcript

This transcript has 29 exons, is annotated with 37 domains and features, is associated with 1675 variant alleles and maps to 82 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000112470.4	ccdc88b-202	5067	1603aa	ENSDARP00000097967.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QPU7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110103.3	ccdc88b-201	3494	983aa	ENSDARP00000098257.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 29, Coding exons: 29, Transcript length: 5,067 bps, Translation length: 1,603 residues

Version

ENSDART00000112470.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]