Transcript: ENSDART00000112451.4 slc31a2-201

Description

solute carrier family 31 member 2 [Source:ZFIN;Acc:ZDB-GENE-030925-25]

Gene Synonyms

sb:cb797, si:ch211-282j22.4

Location

About this transcript

This transcript has 4 exons, is associated with 359 variant alleles and maps to 87 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000134682.2	slc31a2-202	1459	171aa	ENSDARP00000121272.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QC64	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000112451.4	slc31a2-201	860	36aa	ENSDARP00000124746.1	Nonsense mediated decay	F8W2F7	-
ENSDART00000140975.2	slc31a2-203	868	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 860 bps, Translation length: 36 residues

Version

ENSDART00000112451.4

Type

Nonsense mediated decay

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.