Transcript: ENSDART00000112220.4 ftr57-201

Description

finTRIM family, member 57 [Source:ZFIN;Acc:ZDB-GENE-090312-35]

Location

About this transcript

This transcript has 5 exons, is annotated with 30 domains and features, is associated with 372 variant alleles and maps to 331 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	Flags
ENSDART00000134527.2	ftr57-202	1633	538aa	ENSDARP00000113052.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P4: Where the APPRIS core modules are unable to choose a clear principal CDS and there is more than one variant with a distinct (but consecutive) CCDS identifiers, APPRIS selects the longest CCDS isoform as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P4,
ENSDART00000112220.4	ftr57-201	1611	536aa	ENSDARP00000098049.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,611 bps, Translation length: 536 residues

Version

ENSDART00000112220.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.