Transcript: ENSDART00000111986.4 CDC123-203

Description

cell division cycle 123 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1680]

Location

Chromosome 4: 7,876,197-7,883,692 forward strand.

About this transcript

This transcript has 13 exons, is annotated with 8 domains and features, is associated with 94 variant alleles and maps to 161 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000075025.4 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111986.4	CDC123-203	1428	348aa	ENSDARP00000103868.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6PC40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000189601.1	CDC123-204	2878	352aa	ENSDARP00000149629.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000162036.2	CDC123-201	886	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000164245.2	CDC123-202	558	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 1,428 bps, Translation length: 348 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q6PC40

Version

ENSDART00000111986.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000111986.4 CDC123-203

Summary

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Transcript: ENSDART00000111986.4 CDC123-203

Summary

About Us

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