Transcript: ENSDART00000111982.4 SGCE-201

Description

sarcoglycan, epsilon [Source:ZFIN;Acc:ZDB-GENE-030724-1]

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 52 variant alleles and maps to 225 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111982.4	SGCE-201	1716	414aa	ENSDARP00000099762.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q6DHH1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193142.1	SGCE-204	1457	405aa	ENSDARP00000156933.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151120.2	SGCE-202	821	154aa	ENSDARP00000125827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000131865.3	SGCE-203	695	122aa	ENSDARP00000113758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,716 bps, Translation length: 414 residues

Version

ENSDART00000111982.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.