Transcript: ENSDART00000111842.5 SALL1-202

Description

spalt-like transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-020228-2]

Location

About this transcript

This transcript has 3 exons, is annotated with 74 domains and features, is associated with 126 variant alleles and maps to 329 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111842.5	SALL1-202	6552	1313aa	ENSDARP00000102655.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QI36	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000173652.2	SALL1-201	6651	1217aa	ENSDARP00000142758.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSE4	-
ENSDART00000192134.1	SALL1-203	4091	1217aa	ENSDARP00000145089.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSE4	-
ENSDART00000189239.1	SALL1-204	3974	1217aa	ENSDARP00000157563.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A1D5NSE4	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 6,552 bps, Translation length: 1,313 residues

Version

ENSDART00000111842.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]