Transcript: ENSDART00000111822.5 loxl5a-202

Description

lysyl oxidase-like 5a [Source:ZFIN;Acc:ZDB-GENE-070705-186]

Location

About this transcript

This transcript has 6 exons, is annotated with 23 domains and features and maps to 206 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000081910.5	loxl5a-201	1464	487aa	ENSDARP00000076348.5	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PJL8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000111822.5	loxl5a-202	1466	465aa	ENSDARP00000100806.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000144071.3	loxl5a-203	533	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,466 bps, Translation length: 465 residues

Version

ENSDART00000111822.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.