Transcript: ENSDART00000111623.4 cluap1-202

Description

clusterin associated protein 1 [Source:NCBI gene;Acc:406281]

Gene Synonyms

fj16b11, qil, qilin, unm_au5, wu:fj16b11, zgc:56115

Location

About this transcript

This transcript has 12 exons, is annotated with 12 domains and features, is associated with 645 variant alleles and maps to 119 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111623.4	cluap1-202	1760	427aa	ENSDARP00000101015.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RA40	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000134152.2	cluap1-203	823	184aa	ENSDARP00000119132.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R2C8	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000100527.5	cluap1-201	832	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 12, Coding exons: 11, Transcript length: 1,760 bps, Translation length: 427 residues

Version

ENSDART00000111623.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.