Transcript: ENSDART00000111539.4 efcc1-201

Description

EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]

Gene Synonyms

ccdc48, si:dkey-57n24.4

Location

About this transcript

This transcript has 8 exons, is annotated with 14 domains and features, is associated with 1291 variant alleles and maps to 50 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111539.4	efcc1-201	2450	641aa	ENSDARP00000138196.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4IP47	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000188067.1	efcc1-202	891	296aa	ENSDARP00000144760.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q236	-

Summary

Statistics

Exons: 8, Coding exons: 8, Transcript length: 2,450 bps, Translation length: 641 residues

Version

ENSDART00000111539.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

RNA-Seq supported partial [Definitions]