Transcript: ENSDART00000111358.5 aopep-201

Description

aminopeptidase O (putative) [Source:ZFIN;Acc:ZDB-GENE-070410-115]

Location

Chromosome 8: 30,159,329-30,316,436 reverse strand.

About this transcript

This transcript has 16 exons, is annotated with 17 domains and features, is associated with 1722 variant alleles and maps to 242 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000068461.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000143809.3	aopep-205	987	45aa	ENSDARP00000118505.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000111358.5	aopep-201	2626	787aa	ENSDARP00000098475.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1A5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000167065.3	aopep-206	2364	787aa	ENSDARP00000133501.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1A5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000133209.2	aopep-202	799	45aa	ENSDARP00000113016.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000139864.3	aopep-204	760	45aa	ENSDARP00000114227.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000134046.2	aopep-203	824	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,626 bps, Translation length: 787 residues

Version

ENSDART00000111358.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000111358.5 aopep-201

Summary

About Us

Get help

Our sister sites

Follow us

Favourite species

All species

Recent locations

Transcript: ENSDART00000111358.5 aopep-201

Summary

About Us

Get help

Our sister sites

Follow us