Transcript: ENSDART00000111063.5 kctd1-201

Description

potassium channel tetramerization domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040724-194]

Location

About this transcript

This transcript has 5 exons, is annotated with 8 domains and features, is associated with 166 variant alleles and maps to 172 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000111063.5	kctd1-201	2105	271aa	ENSDARP00000098598.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5SNS9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000189225.1	kctd1-203	2465	260aa	ENSDARP00000157270.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000144172.2	kctd1-202	852	284aa	ENSDARP00000122151.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 2,105 bps, Translation length: 271 residues

Version

ENSDART00000111063.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.