Transcript: ENSDART00000110781.7 nfatc4-201

Description

nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]

Gene Synonyms

si:dkeyp-66d1.4, si:dkeyp-66d1.5

Location

About this transcript

This transcript has 13 exons, is annotated with 29 domains and features, is associated with 484 variant alleles and maps to 151 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110781.7	nfatc4-201	3769	865aa	ENSDARP00000104333.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F059	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000154124.2	nfatc4-202	944	230aa	ENSDARP00000128317.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WDL8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000155803.2	nfatc4-203	861	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,769 bps, Translation length: 865 residues

Version

ENSDART00000110781.7

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.