Transcript: ENSDART00000110680.4 htra2-9-201

Description

HtrA serine peptidase 2 [Source:HGNC Symbol;Acc:HGNC:14348]

Location

Chromosome 13: 9,288,940-9,295,890 reverse strand.

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 187 variant alleles and maps to 390 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000069909.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000144142.3	htra2-9-204	1970	436aa	ENSDARP00000117169.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M1NKW3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110680.4	htra2-9-201	604	201aa	ENSDARP00000099874.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000146877.3	htra2-9-206	588	195aa	ENSDARP00000112623.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000140259.2	htra2-9-203	727	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000144714.2	htra2-9-205	543	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000134358.3	htra2-9-202	771	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 604 bps, Translation length: 201 residues

Incomplete CDS

5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete

Version

ENSDART00000110680.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000110680.4 htra2-9-201

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Transcript: ENSDART00000110680.4 htra2-9-201

Summary

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