Transcript: ENSDART00000110571.4 alkal1-201

Description

ALK and LTK ligand 1 [Source:ZFIN;Acc:ZDB-GENE-110411-243]

Gene Synonyms

aug-b, aug-beta, fam150a, si:ch73-98k10.1, si:dkey-30h22.10

Location

Chromosome 8: 18,464,235-18,488,221 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 6 domains and features, is associated with 792 variant alleles and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074387.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110571.4	alkal1-201	2493	170aa	ENSDARP00000099961.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R8V3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000149860.3	alkal1-203	819	152aa	ENSDARP00000124157.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2C9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000148958.3	alkal1-202	755	152aa	ENSDARP00000124774.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W2C9	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 2,493 bps, Translation length: 170 residues

Version

ENSDART00000110571.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000110571.4 alkal1-201

Summary

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Transcript: ENSDART00000110571.4 alkal1-201

Summary

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