Transcript: ENSDART00000110289.4 tcte1-201

Description

t-complex-associated-testis-expressed 1 [Source:HGNC Symbol;Acc:HGNC:11693]

Location

Chromosome 20: 51,344,376-51,355,508 reverse strand.

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 480 variant alleles and maps to 80 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000077387.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000110289.4	tcte1-201	1392	463aa	ENSDARP00000101763.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0AB32T7G7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000151690.3	tcte1-203	1572	448aa	ENSDARP00000125702.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	I3IS38	APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000151620.2	tcte1-202	870	238aa	ENSDARP00000126094.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,392 bps, Translation length: 463 residues

Version

ENSDART00000110289.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000110289.4 tcte1-201

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Transcript: ENSDART00000110289.4 tcte1-201

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