Transcript: ENSDART00000110197.3 zgc:154058-202

Description

zgc:154058 [Source:ZFIN;Acc:ZDB-GENE-060929-48]

Location

About this transcript

This transcript has 7 exons, is annotated with 6 domains and features, is associated with 1135 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000101859.6	zgc:154058-201	1207	272aa	ENSDARP00000092634.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QGB9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110197.3	zgc:154058-202	1335	137aa	ENSDARP00000103593.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A694	-
ENSDART00000136064.2	zgc:154058-203	914	39aa	ENSDARP00000115023.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B8A693	-

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,335 bps, Translation length: 137 residues

Version

ENSDART00000110197.3

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.