Transcript: ENSDART00000109890.4 CAPN10-203

Description

calpain 10 [Source:ZFIN;Acc:ZDB-GENE-110411-137]

Location

About this transcript

This transcript has 11 exons, is annotated with 26 domains and features, is associated with 377 variant alleles and maps to 113 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109890.4	CAPN10-203	1977	658aa	ENSDARP00000097691.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000148595.3	CAPN10-202	2684	649aa	ENSDARP00000123910.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8N7UW33	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000150002.2	CAPN10-201	421	26aa	ENSDARP00000125074.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,977 bps, Translation length: 658 residues

Version

ENSDART00000109890.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.