Transcript: ENSDART00000109703.4 col6a4a-201

Description

collagen, type VI, alpha 4a [Source:ZFIN;Acc:ZDB-GENE-041111-303]

Gene Synonyms

col6a4a, col6a6, im:7152043, si:dkey-202m9.3

Location

About this transcript

This transcript has 39 exons, is annotated with 92 domains and features, is associated with 68 variant alleles and maps to 72 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109703.4	col6a4a-201	8669	2543aa	ENSDARP00000103549.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q924	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000156780.3	col6a4a-202	5445	1756aa	ENSDARP00000128796.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEZ4	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 39, Coding exons: 39, Transcript length: 8,669 bps, Translation length: 2,543 residues

Incomplete CDS

5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete

Version

ENSDART00000109703.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

not organism-supported [Definitions]