Transcript: ENSDART00000109585.4 hmces-201

Description

5-hydroxymethylcytosine binding, ES cell specific [Source:ZFIN;Acc:ZDB-GENE-070620-10]

Gene Synonyms

im:7137789, zgc:165500

Location

About this transcript

This transcript has 7 exons, is annotated with 12 domains and features, is associated with 247 variant alleles and maps to 89 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109585.4	hmces-201	1461	353aa	ENSDARP00000100716.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A5PLB0	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000135724.3	hmces-202	786	226aa	ENSDARP00000120810.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QII3	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 6, Transcript length: 1,461 bps, Translation length: 353 residues

Version

ENSDART00000109585.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.