Transcript: ENSDART00000109561.4 zgc:163121-202

Description

zgc:163121 [Source:ZFIN;Acc:ZDB-GENE-070424-80]

Location

About this transcript

This transcript has 15 exons, is annotated with 11 domains and features, is associated with 523 variant alleles and maps to 98 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109561.4	zgc:163121-202	1671	546aa	ENSDARP00000103502.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1P2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000077720.6	zgc:163121-201	2053	382aa	ENSDARP00000072186.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0V1P3	-
ENSDART00000137542.2	zgc:163121-203	809	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 15, Coding exons: 15, Transcript length: 1,671 bps, Translation length: 546 residues

Version

ENSDART00000109561.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.