Transcript: ENSDART00000109534.4 cdh16-201

Description

cadherin 16, KSP-cadherin [Source:ZFIN;Acc:ZDB-GENE-140106-140]

Gene Synonyms

zmp:0000001180

Location

About this transcript

This transcript has 10 exons, is annotated with 33 domains and features, is associated with 1116 variant alleles and maps to 52 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165077.3	cdh16-202	5564	819aa	ENSDARP00000135277.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4II09	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000193378.1	cdh16-203	4935	481aa	ENSDARP00000147827.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q909	-
ENSDART00000109534.4	cdh16-201	4829	503aa	ENSDARP00000100794.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FF20	-

Summary

Statistics

Exons: 10, Coding exons: 10, Transcript length: 4,829 bps, Translation length: 503 residues

Version

ENSDART00000109534.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.