Transcript: ENSDART00000109418.5 SPOPL-201

Description

speckle type BTB/POZ protein like b [Source:ZFIN;Acc:ZDB-GENE-061103-277]

Location

About this transcript

This transcript has 13 exons, is annotated with 16 domains and features, is associated with 894 variant alleles and maps to 344 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109418.5	SPOPL-201	2473	392aa	ENSDARP00000103804.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0JMG1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000015021.10	SPOPL-202	485	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 13, Coding exons: 10, Transcript length: 2,473 bps, Translation length: 392 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A0JMG1

Version

ENSDART00000109418.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.