Transcript: ENSDART00000109107.5 CSRNP1-201

Description

cysteine-serine-rich nuclear protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1515]

Location

About this transcript

This transcript has 5 exons, is annotated with 20 domains and features, is associated with 121 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109107.5	CSRNP1-201	1836	566aa	ENSDARP00000098740.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QH67	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000056082.5	CSRNP1-204	1538	433aa	ENSDARP00000056081.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000135405.2	CSRNP1-203	808	201aa	ENSDARP00000112890.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000133889.2	CSRNP1-202	399	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,836 bps, Translation length: 566 residues

Version

ENSDART00000109107.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.