Transcript: ENSDART00000109083.5 txnl4b-202

Description

thioredoxin-like 4B [Source:ZFIN;Acc:ZDB-GENE-051030-63]

Gene Synonyms

zgc:123253

Location

About this transcript

This transcript has 3 exons, is annotated with 9 domains and features, is associated with 211 variant alleles and maps to 177 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109083.5	txnl4b-202	960	149aa	ENSDARP00000100887.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3B728	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000081945.4	txnl4b-201	835	149aa	ENSDARP00000076383.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q3B728	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000132385.2	txnl4b-203	844	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 960 bps, Translation length: 149 residues

Version

ENSDART00000109083.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.