Transcript: ENSDART00000109004.5 zgc:174895-201

Description

zgc:174895 [Source:ZFIN;Acc:ZDB-GENE-070928-41]

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features, is associated with 339 variant alleles and maps to 74 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000109004.5	zgc:174895-201	1850	200aa	ENSDARP00000099844.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QWW2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155708.2	zgc:174895-202	984	203aa	ENSDARP00000129362.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000156835.3	zgc:174895-203	915	186aa	ENSDARP00000128863.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QBT5	-

Summary

Statistics

Exons: 5, Coding exons: 5, Transcript length: 1,850 bps, Translation length: 200 residues

Version

ENSDART00000109004.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.