Transcript: ENSDART00000108928.4 pnpla8-201

Description

patatin-like phospholipase domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070705-553]

Gene Synonyms

si:dkeyp-81f3.3

Location

About this transcript

This transcript has 10 exons, is annotated with 14 domains and features, is associated with 418 variant alleles and maps to 352 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000108928.4	pnpla8-201	2854	694aa	ENSDARP00000100874.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1RE62	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000155349.3	pnpla8-203	1295	121aa	ENSDARP00000128622.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WEH1	-
ENSDART00000135165.2	pnpla8-202	554	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 10, Coding exons: 9, Transcript length: 2,854 bps, Translation length: 694 residues

Version

ENSDART00000108928.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.