Transcript: ENSDART00000108919.5 FARP1-205

Description

FERM, RhoGEF (ARHGEF) and pleckstrin domain protein 1 (chondrocyte-derived) [Source:ZFIN;Acc:ZDB-GENE-070424-163]

Location

Chromosome 1: 2,301,961-2,394,973 forward strand.

About this transcript

This transcript has 3 exons, is annotated with 6 domains and features, is associated with 1624 variant alleles and maps to 148 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000074381.6 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000142944.2	FARP1-203	3696	1025aa	ENSDARP00000113717.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QIC8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000143361.3	FARP1-202	2616	811aa	ENSDARP00000115997.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000108919.5	FARP1-205	824	141aa	ENSDARP00000098288.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000183832.1	FARP1-206	789	262aa	ENSDARP00000157154.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000157662.2	FARP1-207	426	141aa	ENSDARP00000140218.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000141036.2	FARP1-201	638	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000143758.2	FARP1-204	560	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 2, Transcript length: 824 bps, Translation length: 141 residues

Version

ENSDART00000108919.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000108919.5 FARP1-205

Summary

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Transcript: ENSDART00000108919.5 FARP1-205

Summary

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