Transcript: ENSDART00000108736.5 ADAM12-202

Description

ADAM metallopeptidase domain 12b [Source:ZFIN;Acc:ZDB-GENE-070809-1]

Location

Chromosome 17: 32,158,990-32,334,107 forward strand.

About this transcript

This transcript has 23 exons, is annotated with 35 domains and features, is associated with 3542 variant alleles and maps to 95 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000079068.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000165348.2	ADAM12-203	3205	941aa	ENSDARP00000135966.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A0R4INJ8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000108736.5	ADAM12-202	4497	924aa	ENSDARP00000099354.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000157347.2	ADAM12-201	894	48aa	ENSDARP00000129618.1	Nonsense mediated decay	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 23, Coding exons: 23, Transcript length: 4,497 bps, Translation length: 924 residues

Version

ENSDART00000108736.5

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Transcript: ENSDART00000108736.5 ADAM12-202

Summary

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Transcript: ENSDART00000108736.5 ADAM12-202

Summary

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