Transcript: ENSDART00000108556.5 npm2a-201

Description

nucleophosmin/nucleoplasmin, 2a [Source:ZFIN;Acc:ZDB-GENE-060810-57]

Location

About this transcript

This transcript has 6 exons, is annotated with 7 domains and features, is associated with 329 variant alleles and maps to 81 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000108556.5	npm2a-201	895	156aa	ENSDARP00000099178.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UYT8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147942.2	npm2a-202	941	156aa	ENSDARP00000116605.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B0UYT8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 6, Coding exons: 5, Transcript length: 895 bps, Translation length: 156 residues

Version

ENSDART00000108556.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.