Transcript: ENSDART00000106671.5 tgfb5-201

Description

transforming growth factor, beta 5 [Source:ZFIN;Acc:ZDB-GENE-130425-3]

Location

About this transcript

This transcript has 7 exons, is annotated with 31 domains and features, is associated with 407 variant alleles and maps to 181 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000106671.5	tgfb5-201	4267	414aa	ENSDARP00000097449.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9QGK2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000160848.2	tgfb5-202	772	71aa	ENSDARP00000141665.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,

Summary

Statistics

Exons: 7, Coding exons: 7, Transcript length: 4,267 bps, Translation length: 414 residues

Version

ENSDART00000106671.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Annotation Attributes

RNA-Seq supported partial [Definitions]