Transcript: ENSDART00000106641.4 magt1-202

Description

magnesium transporter 1 [Source:NCBI gene;Acc:324944]

Gene Synonyms

fc49b02, wu:fc49b02, zgc:56218

Location

About this transcript

This transcript has 6 exons, is associated with 32 variant alleles and maps to 90 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000080864.6	magt1-201	1639	328aa	ENSDARP00000075309.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q7ZV50	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131343.2	magt1-203	531	131aa	ENSDARP00000115114.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHD8	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000106641.4	magt1-202	801	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000147664.3	magt1-204	481	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 6, Coding exons: 0, Transcript length: 801 bps,

Version

ENSDART00000106641.4

Type

Retained intron

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

Annotation Attributes

retained intron CDS [Definitions]