Transcript: ENSDART00000106188.6 cpa6-201

Description

carboxypeptidase A6 [Source:ZFIN;Acc:ZDB-GENE-091204-331]

Gene Synonyms

si:dkey-78n18.1

Location

About this transcript

This transcript has 11 exons, is annotated with 16 domains and features, is associated with 667 variant alleles and maps to 174 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000106188.6	cpa6-201	1898	442aa	ENSDARP00000096966.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7F2H8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000182518.1	cpa6-204	5249	408aa	ENSDARP00000150678.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8QFE3	-
ENSDART00000144244.2	cpa6-203	686	175aa	ENSDARP00000113966.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QHZ1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000134518.2	cpa6-202	748	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 11, Coding exons: 11, Transcript length: 1,898 bps, Translation length: 442 residues

Version

ENSDART00000106188.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.