Transcript: ENSDART00000106163.5 sun1a-201

Description

Sad1 and UNC84 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-060825-353]

Location

About this transcript

This transcript has 16 exons, is annotated with 23 domains and features, is associated with 701 variant alleles and maps to 109 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000106163.5	sun1a-201	2006	574aa	ENSDARP00000096941.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000124562.3	sun1a-202	3024	840aa	ENSDARP00000106535.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E7FB83	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152806.2	sun1a-204	769	220aa	ENSDARP00000126798.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000152672.3	sun1a-203	620	207aa	ENSDARP00000127001.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,

Summary

Statistics

Exons: 16, Coding exons: 15, Transcript length: 2,006 bps, Translation length: 574 residues

Version

ENSDART00000106163.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.