Transcript: ENSDART00000105997.4 TRPA1-201

Description

transient receptor potential cation channel, subfamily A, member 1b [Source:ZFIN;Acc:ZDB-GENE-050106-1]

Location

About this transcript

This transcript has 28 exons, is annotated with 69 domains and features, is associated with 2144 variant alleles and maps to 169 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105997.4	TRPA1-201	4100	1120aa	ENSDARP00000096775.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000183008.1	TRPA1-203	5993	1107aa	ENSDARP00000145424.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6D5I5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000126769.2	TRPA1-202	3324	1107aa	ENSDARP00000106127.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B6D5I5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 28, Coding exons: 27, Transcript length: 4,100 bps, Translation length: 1,120 residues

Version

ENSDART00000105997.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.