Transcript: ENSDART00000105854.5 JOSD1-201

Description

Josephin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060929-260]

Gene Synonyms

zgc:153682

Location

About this transcript

This transcript has 5 exons, is annotated with 7 domains and features and maps to 217 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105854.5	JOSD1-201	1922	235aa	ENSDARP00000096632.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08C38	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000186074.1	JOSD1-202	3919	235aa	ENSDARP00000152754.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q08C38	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 1,922 bps, Translation length: 235 residues

Version

ENSDART00000105854.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.