Transcript: ENSDART00000105784.6 cldn11b-201

Description

claudin 11b [Source:ZFIN;Acc:ZDB-GENE-010328-13]

Gene Synonyms

cldn11, fb97c11, wu:fb97c11

Location

About this transcript

This transcript has 3 exons, is annotated with 17 domains and features, is associated with 403 variant alleles and maps to 139 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105784.6	cldn11b-201	2843	256aa	ENSDARP00000096562.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QNU3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000122554.2	cldn11b-202	1916	256aa	ENSDARP00000105607.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A4QNU3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,843 bps, Translation length: 256 residues

Version

ENSDART00000105784.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.