Transcript: ENSDART00000105768.6 zmynd11-202

Description

zinc finger, MYND-type containing 11 [Source:ZFIN;Acc:ZDB-GENE-050522-301]

Gene Synonyms

Bram1, bs69, wu:fi38d06, zgc:110370, zgc:152745

Location

Chromosome 24: 27,224,743-27,256,338 reverse strand.

About this transcript

This transcript has 17 exons, is annotated with 35 domains and features, is associated with 1298 variant alleles and maps to 258 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000057249.7 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105768.6	zmynd11-202	3901	640aa	ENSDARP00000096546.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1R4W7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000181182.1	zmynd11-205	4994	629aa	ENSDARP00000144744.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8PVB4	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000079863.7	zmynd11-201	2437	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134380.2	zmynd11-204	1019	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-
ENSDART00000134339.2	zmynd11-203	853	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 17, Coding exons: 16, Transcript length: 3,901 bps, Translation length: 640 residues

Version

ENSDART00000105768.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000105768.6 zmynd11-202

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Transcript: ENSDART00000105768.6 zmynd11-202

Summary

About Us

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