Transcript: ENSDART00000105711.6 SH3BP4-201

Description

SH3-domain binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-040303-3]

Location

Chromosome 22: 13,886,892-13,942,575 forward strand.

About this transcript

This transcript has 5 exons, is annotated with 16 domains and features, is associated with 1007 variant alleles and maps to 209 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020000.11 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105711.6	SH3BP4-201	3429	965aa	ENSDARP00000096489.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVQ2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000022654.8	SH3BP4-202	6312	965aa	ENSDARP00000007868.8	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVQ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000130585.4	SH3BP4-203	5665	965aa	ENSDARP00000110108.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q1LVQ2	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 5, Coding exons: 4, Transcript length: 3,429 bps, Translation length: 965 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q1LVQ2

Version

ENSDART00000105711.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.

Transcript: ENSDART00000105711.6 SH3BP4-201

Summary

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Transcript: ENSDART00000105711.6 SH3BP4-201

Summary

About Us

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