Transcript: ENSDART00000105678.6 LRRC39-201

Description

leucine rich repeat containing 39 [Source:ZFIN;Acc:ZDB-GENE-050417-279]

Location

About this transcript

This transcript has 9 exons, is annotated with 19 domains and features, is associated with 183 variant alleles and maps to 86 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105678.6	LRRC39-201	1506	343aa	ENSDARP00000096455.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PV96 F1R6I3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000162685.2	LRRC39-202	1301	343aa	ENSDARP00000136641.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A8M9PV96 F1R6I3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 9, Coding exons: 8, Transcript length: 1,506 bps, Translation length: 343 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: F1R6I3

Version

ENSDART00000105678.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.