Transcript: ENSDART00000105175.4 LRFN5-201

Description

leucine rich repeat and fibronectin type III domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-080327-17]

Location

About this transcript

This transcript has 2 exons, is annotated with 43 domains and features, is associated with 750 variant alleles and maps to 123 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000171689.2	LRFN5-202	3083	786aa	ENSDARP00000130591.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9H7	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000105175.4	LRFN5-201	2361	786aa	ENSDARP00000095946.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1Q9H7	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 2, Coding exons: 2, Transcript length: 2,361 bps, Translation length: 786 residues

Version

ENSDART00000105175.4

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.