Transcript: ENSDART00000105174.6 stm-202

Description

starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]

Location

About this transcript

This transcript has 26 exons, is annotated with 26 domains and features, is associated with 796 variant alleles and maps to 209 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000105174.6	stm-202	3332	613aa	ENSDARP00000095945.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A2VD23	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000110763.5	stm-203	746	231aa	ENSDARP00000100826.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000145710.3	stm-204	706	217aa	ENSDARP00000115212.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000074620.5	stm-201	691	212aa	ENSDARP00000069107.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 26, Coding exons: 25, Transcript length: 3,332 bps, Translation length: 613 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: A2VD23

Version

ENSDART00000105174.6

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.