Transcript: ENSDART00000104936.6 si:dkey-63j12.4-201

Description

si:dkey-63j12.4 [Source:ZFIN;Acc:ZDB-GENE-040724-17]

Location

Chromosome 20: 9,752,382-9,760,424 reverse strand.

About this transcript

This transcript has 4 exons, is annotated with 1 domain and feature, is associated with 167 variant alleles and maps to 254 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000089556.5 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000152239.3	si:dkey-63j12.4-202	1074	114aa	ENSDARP00000126889.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5VSD1	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152498.2	si:dkey-63j12.4-204	1022	73aa	ENSDARP00000126867.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000104936.6	si:dkey-63j12.4-201	502	114aa	ENSDARP00000095706.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	Q5VSD1	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000152258.2	si:dkey-63j12.4-203	145	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 4, Coding exons: 3, Transcript length: 502 bps, Translation length: 114 residues

Version

ENSDART00000104936.6

Type

Protein coding

Annotation Method

Manual annotation (determined on a case-by-case basis) from the Havana project.

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Transcript: ENSDART00000104936.6 si:dkey-63j12.4-201

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Transcript: ENSDART00000104936.6 si:dkey-63j12.4-201

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