Transcript: ENSDART00000104838.5 psmb8a-201

Description

proteasome 20S subunit beta 8A [Source:ZFIN;Acc:ZDB-GENE-990415-141]

Gene Synonyms

beta5ia, lmp7, psmb8, psmb8a

Location

About this transcript

This transcript has 6 exons, is annotated with 12 domains and features, is associated with 251 variant alleles and maps to 278 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104838.5	psmb8a-201	1226	271aa	ENSDARP00000095608.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	O57330	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147177.2	psmb8a-202	638	84aa	ENSDARP00000126012.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,

Summary

Statistics

Exons: 6, Coding exons: 6, Transcript length: 1,226 bps, Translation length: 271 residues

Version

ENSDART00000104838.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.