Transcript: ENSDART00000104592.5 pm20d1.2-201

Description

peptidase M20 domain containing 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-061013-637]

Location

About this transcript

This transcript has 13 exons, is annotated with 19 domains and features, is associated with 348 variant alleles and maps to 198 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104592.5	pm20d1.2-201	3959	522aa	ENSDARP00000095363.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B2GT51 Q08BB2	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000131911.2	pm20d1.2-202	489	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 13, Coding exons: 13, Transcript length: 3,959 bps, Translation length: 522 residues

Uniprot

This transcript corresponds to the following Uniprot identifiers: Q08BB2

Version

ENSDART00000104592.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.