Transcript: ENSDART00000104478.4 fxr1-201

Description

fragile X mental retardation, autosomal homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5431]

Gene Synonyms

wu:fb16f11, wu:fd18c10

Location

About this transcript

This transcript has 16 exons, is annotated with 38 domains and features, is associated with 620 variant alleles and maps to 206 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000149482.3	fxr1-203	2753	645aa	ENSDARP00000124192.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F8W4G8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 5' truncation in transcript evidence prevents annotation of the start of the CDS.CDS 5' incomplete,
ENSDART00000104478.4	fxr1-201	2737	622aa	ENSDARP00000095251.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QLR3	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000148474.2	fxr1-202	669	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 16, Coding exons: 16, Transcript length: 2,737 bps, Translation length: 622 residues

Version

ENSDART00000104478.4

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.