Transcript: ENSDART00000104257.4 lpin1-201

Description

lipin 1 [Source:ZFIN;Acc:ZDB-GENE-080722-2]

Gene Synonyms

zgc:194552, zgc:194558

Location

Chromosome 17: 30,450,163-30,468,606 forward strand.

About this transcript

This transcript has 20 exons, is annotated with 18 domains and features, is associated with 821 variant alleles and maps to 151 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000020239.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000155264.3	lpin1-204	4806	920aa	ENSDARP00000129564.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WH54	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P5: Where the APPRIS core modules are unable to choose a clear principal variant and none of the candidate variants are annotated by CCDS, APPRIS selects the longest of the candidate isoforms as the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P5,
ENSDART00000104257.4	lpin1-201	2844	894aa	ENSDARP00000095032.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	B3DIU0	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000153939.3	lpin1-203	874	226aa	ENSDARP00000129389.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	X1WGN1	3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000153826.2	lpin1-202	435	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 20, Coding exons: 20, Transcript length: 2,844 bps, Translation length: 894 residues

Version

ENSDART00000104257.4

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000104257.4 lpin1-201

Summary

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Transcript: ENSDART00000104257.4 lpin1-201

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