Transcript: ENSDART00000104107.5 zgc:173544-201

Description

zgc:173544 [Source:ZFIN;Acc:ZDB-GENE-030131-6229]

Location

About this transcript

This transcript has 3 exons, is annotated with 19 domains and features, is associated with 331 variant alleles and maps to 115 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104107.5	zgc:173544-201	2271	702aa	ENSDARP00000094882.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	F1QMW9	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical,
ENSDART00000193291.1	zgc:173544-205	6818	723aa	ENSDARP00000149415.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2R8Q8I5	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000170731.2	zgc:173544-204	813	71aa	ENSDARP00000138763.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000162621.2	zgc:173544-203	451	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-
ENSDART00000157561.2	zgc:173544-202	350	No protein	-	Gene/transcript that doesn't contain an open reading frame (ORF).Processed transcript	-	-

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 2,271 bps, Translation length: 702 residues

Version

ENSDART00000104107.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.