Transcript: ENSDART00000104004.6 scn4ab-202

Description

sodium channel, voltage-gated, type IV, alpha, b [Source:ZFIN;Acc:ZDB-GENE-051201-1]

Location

Chromosome 3: 22,270,463-22,316,844 forward strand.

About this transcript

This transcript has 25 exons, is annotated with 108 domains and features, is associated with 209 variant alleles and maps to 138 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000034588.10 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000104004.6	scn4ab-202	7646	1835aa	ENSDARP00000094779.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A0A2C9F1K3	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P2: Where the APPRIS core modules are unable to choose a clear principal variant (approximately 25% of human protein coding genes), the database chooses two or more of the CDS variants as "candidates" to be the principal variant. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P2,
ENSDART00000168970.2	scn4ab-203	7680	1783aa	ENSDARP00000140995.2	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	APPRIS ALT2: For genes in which the APPRIS core modules are unable to choose a clear principal isoform, the ALT1 is the candidate transcript(s) models that appear to be conserved in fewer than three tested species. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS ALT2,
ENSDART00000044157.8	scn4ab-201	7240	1784aa	ENSDARP00000044156.7	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-

Summary

Statistics

Exons: 25, Coding exons: 25, Transcript length: 7,646 bps, Translation length: 1,835 residues

Version

ENSDART00000104004.6

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

Transcript: ENSDART00000104004.6 scn4ab-202

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Transcript: ENSDART00000104004.6 scn4ab-202

Summary

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