Transcript: ENSDART00000103523.5 grna-201

Description

granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]

Gene Synonyms

grn, pgrn-a, progranulin, sb:eu337, wu:fb11g12, wu:fj18f05, zfPGRN-A

Location

Chromosome 3: 29,914,428-29,941,357 reverse strand.

About this transcript

This transcript has 20 exons, is annotated with 62 domains and features, is associated with 278 variant alleles and maps to 137 oligo probes.

Gene

This transcript is a product of gene ENSDARG00000004954.12 Show transcript tableHide transcript table

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000137973.3	grna-202	4160	1049aa	ENSDARP00000113859.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	E9QI45	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000147732.3	grna-203	3632	873aa	ENSDARP00000123399.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000103523.5	grna-201	3631	873aa	ENSDARP00000094299.3	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	-
ENSDART00000151275.2	grna-205	840	280aa	ENSDARP00000125830.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000151083.3	grna-204	567	189aa	ENSDARP00000125945.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000151525.3	grna-206	545	182aa	ENSDARP00000126334.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000151655.2	grna-207	440	147aa	ENSDARP00000125978.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	-	5' and 3' truncations in transcript evidence prevent annotation of the start and the end of the CDS.CDS 5' and 3' incomplete,
ENSDART00000151814.2	grna-208	835	No protein	-	An alternatively spliced transcript believed to contain intronic sequence relative to other, coding, transcripts of the same gene.Retained intron	-	-

Summary

Statistics

Exons: 20, Coding exons: 18, Transcript length: 3,631 bps, Translation length: 873 residues

Version

ENSDART00000103523.5

Type

Protein coding

Annotation Method

Annotation produced by the Ensembl genebuild.

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Transcript: ENSDART00000103523.5 grna-201

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Transcript: ENSDART00000103523.5 grna-201

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