Transcript: ENSDART00000103506.5 hpcal4-201

Description

hippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]

Location

About this transcript

This transcript has 3 exons, is annotated with 26 domains and features, is associated with 97 variant alleles and maps to 122 oligo probes.

Gene

Transcript ID	Name	bp	Protein	Translation ID	Biotype	UniProt Match	Flags
ENSDART00000103506.5	hpcal4-201	576	191aa	ENSDARP00000094282.4	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KPW8	A single transcript chosen for a gene which is the most conserved, most highly expressed, has the longest coding sequence and is represented in other key resources, such as NCBI and UniProt. This is defined in detail on http://www.ensembl.org/info/genome/genebuild/canonical.htmlEnsembl Canonical, 3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete,
ENSDART00000185650.1	hpcal4-203	5892	191aa	ENSDARP00000152998.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KPW8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,
ENSDART00000171006.3	hpcal4-202	5718	191aa	ENSDARP00000132349.1	Gene/transcipt that contains an open reading frame (ORF).Protein coding	A3KPW8	APPRIS P1: Transcript(s) expected to code for the main functional isoform based solely on the core modules in the APPRIS. APPRIS is a system to annotate alternatively spliced transcripts based on a range of computational methods to identify the most functionally important transcript(s) of a gene. APPRIS P1,

Summary

Statistics

Exons: 3, Coding exons: 3, Transcript length: 576 bps, Translation length: 191 residues

Incomplete CDS

3' truncation in transcript evidence prevents annotation of the end of the CDS.CDS 3' incomplete

Version

ENSDART00000103506.5

Type

Protein coding

Annotation Method

Transcript where the Ensembl genebuild transcript and the Havana manual annotation have the same sequence, for every base pair. See article.